A Gold-PROTAC Degrades the Oncogenic Tyrosine Kinase MERTK: Insights into the Degradome from a Steady-State System

Author(s)
Sophie R Thomas, Thomas Iellici, Mihyun Park, Elisabeth Klaus, Andrea Bileck, Christopher Gerner, Samuel M Meier-Menches, Angela Casini
Abstract

Proteolysis targeting chimeras (PROTACs) are bifunctional molecules designed to induce the degradation of specific proteins within a cell. While most PROTACs are noncovalent interactors, covalent PROTACs may benefit from improved selectivity and pharmacodynamics, yet remain largely understudied. Here, a covalent gold-based PROTAC (AuPROTAC) was synthesized, featuring a Au(III)-warhead, known to induce cysteine-arylation in a gold-templated two-step mechanism, linked to a cereblon binding moiety. The degradome of the AuPROTAC was characterized by establishing a cycloheximide chase assay in a nonproliferative steady-state HL-60 cell culture, enabling the identification of PROTAC degradation targets uncoupled from confounding effects originating from cell-cycle-dependent translational patterns. The method was verified using the known SMARCA2 and PBRM1-degrader ACBI2. AuPROTAC could degrade the oncogenic tyrosine kinase MERTK and the thioredoxin-like 1 protein TXNL1. Their degradation was successfully rescued by proteasome inhibition. Proteome-wide degradation selectivity was further characterized by ranking the degraded targets according to the reduction extent of their protein half-lives. Interestingly, the AuPROTAC degraded a relatively limited number of proteins (95) when compared to ACBI2 (221).

Organisation(s)
Department of Inorganic Chemistry, Department of Analytical Chemistry, Joint Metabolome Facility
External organisation(s)
Technische Universität München, Vienna Doctoral School in Chemistry (DoSChem)
Journal
ACS Chemical Biology
Volume
21
Pages
170-186
No. of pages
17
ISSN
1554-8929
DOI
https://doi.org/10.1021/acschembio.5c00860
Publication date
01-2026
Peer reviewed
Yes
Austrian Fields of Science 2012
104004 Chemical biology, 106037 Proteomics, 104002 Analytical chemistry
Keywords
ASJC Scopus subject areas
Biochemistry, Molecular Medicine
Portal url
https://ucrisportal.univie.ac.at/en/publications/af6c54e7-97d6-467f-aaac-1a8856104bc8